scripts/Revisions_Only_MinTrialCount.m

%%

% Just for revisions


%% CONFLICT  CONGRUENT
BigN=size(MEGA_ERP_minsize,1);
tx=-2000:2:1998;
t1=find(tx==-500);  t2=find(tx==1000);
tx2disp=-500:2:1000;

P2=200; P2range=10;  % in ms
N2=275; N2range=20;
P3=450; P3range=150;
LATE=700; LATErange=250;

figure; 
subplot(4,1,1); hold on
plot(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,19,t1:t2,[2,4,6,8]),4),1)),'r','linewidth',2);
plot(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,19,t1:t2,[1,3,5,7]),4),1)),'b','linewidth',2);
shadedErrorBar(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,19,t1:t2,[2,4,6,8]),4),1)),squeeze(std(mean(MEGA_ERP_minsize(:,19,t1:t2,[2,4,6,8]),4),1))./sqrt(BigN),'r');
shadedErrorBar(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,19,t1:t2,[1,3,5,7]),4),1)),squeeze(std(mean(MEGA_ERP_minsize(:,19,t1:t2,[1,3,5,7]),4),1))./sqrt(BigN),'b');
plot(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,19,t1:t2,[2,4,6,8]),4),1)),'r','linewidth',2);
plot(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,19,t1:t2,[1,3,5,7]),4),1)),'b','linewidth',2);
plot(mean(mean(RT(:,[2,4,6,8]))),[10],'ro'); 
plot(mean(mean(RT(:,[1,3,5,7]))),[10],'bo');
plot([0 0],[-5 15],'k:'); plot([-500 1000],[0 0],'k:');
%plot([P2 P2],[-5 15],'m'); plot([P2-10 P2-10],[-5 15],'c'); plot([P2+10 P2+10],[-5 15],'c'); text(P2,-5,'P2');
plot([N2 N2],[-5 15],'m'); plot([N2-20 N2-20],[-5 15],'c'); plot([N2+20 N2+20],[-5 15],'c'); text(N2,-5,'N2');
title('FCz')
legend({'CONFLICT','CONGRUENT'})

subplot(4,1,2); hold on
shadedErrorBar(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,28,t1:t2,[2,4,6,8]),4),1)),squeeze(std(mean(MEGA_ERP_minsize(:,28,t1:t2,[2,4,6,8]),4),1))./sqrt(BigN),'r');
shadedErrorBar(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,28,t1:t2,[1,3,5,7]),4),1)),squeeze(std(mean(MEGA_ERP_minsize(:,28,t1:t2,[1,3,5,7]),4),1))./sqrt(BigN),'b');
plot(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,28,t1:t2,[2,4,6,8]),4),1)),'r','linewidth',2);
plot(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,28,t1:t2,[1,3,5,7]),4),1)),'b','linewidth',2);
plot(mean(mean(RT(:,[2,4,6,8]))),[10],'ro'); 
plot(mean(mean(RT(:,[1,3,5,7]))),[10],'bo');
plot([0 0],[-5 15],'k:'); plot([-500 1000],[0 0],'k:');
%plot([P2 P2],[-5 15],'m'); plot([P2-10 P2-10],[-5 15],'c'); plot([P2+10 P2+10],[-5 15],'c'); text(P2,-5,'P2');
%plot([N2 N2],[-5 15],'m'); plot([N2-20 N2-20],[-5 15],'c'); plot([N2+20 N2+20],[-5 15],'c'); text(N2,-5,'N2');
plot([P3 P3],[-5 15],'m'); plot([P3-P3range P3-P3range],[-5 15],'c'); plot([P3+P3range P3+P3range],[-5 15],'c'); text(P3,-5,'P3');
title('Cz')

subplot(4,1,3); hold on
shadedErrorBar(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,46,t1:t2,[2,4,6,8]),4),1)),squeeze(std(mean(MEGA_ERP_minsize(:,46,t1:t2,[2,4,6,8]),4),1))./sqrt(BigN),'r');
shadedErrorBar(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,46,t1:t2,[1,3,5,7]),4),1)),squeeze(std(mean(MEGA_ERP_minsize(:,46,t1:t2,[1,3,5,7]),4),1))./sqrt(BigN),'b');
plot(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,46,t1:t2,[2,4,6,8]),4),1)),'r','linewidth',2);
plot(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,46,t1:t2,[1,3,5,7]),4),1)),'b','linewidth',2);
plot(mean(mean(RT(:,[2,4,6,8]))),[10],'ro'); 
plot(mean(mean(RT(:,[1,3,5,7]))),[10],'bo');
plot([0 0],[-5 15],'k:'); plot([-500 1000],[0 0],'k:');
plot([P3 P3],[-5 15],'m'); plot([P3-P3range P3-P3range],[-5 15],'c'); plot([P3+P3range P3+P3range],[-5 15],'c'); text(P3,-5,'P3');
plot([LATE LATE],[-5 15],'m'); plot([LATE-LATErange LATE-LATErange],[-5 15],'c'); plot([LATE+LATErange LATE+LATErange],[-5 15],'c'); text(LATE,-5,'LATE');
title('Pz')

subplot(4,1,4); hold on
tx=-2000:2:1998;
LRP_t1=find(tx==-1000);  LRP_t2=find(tx==500);
LRP_tx2disp=-1000:2:500;
shadedErrorBar(LRP_tx2disp,squeeze(mean(mean(MEGA_ERP_LRP_minsize(:,LRP_t1:LRP_t2,[2,4,6,8]),3),1)),squeeze(std(mean(MEGA_ERP_LRP_minsize(:,LRP_t1:LRP_t2,[2,4,6,8]),3),1))./sqrt(BigN),'r');
shadedErrorBar(LRP_tx2disp,squeeze(mean(mean(MEGA_ERP_LRP_minsize(:,LRP_t1:LRP_t2,[1,3,5,7]),3),1)),squeeze(std(mean(MEGA_ERP_LRP_minsize(:,LRP_t1:LRP_t2,[1,3,5,7]),3),1))./sqrt(BigN),'b');
plot(LRP_tx2disp,squeeze(mean(mean(MEGA_ERP_LRP_minsize(:,LRP_t1:LRP_t2,[2,4,6,8]),3),1)),'r','linewidth',2);
plot(LRP_tx2disp,squeeze(mean(mean(MEGA_ERP_LRP_minsize(:,LRP_t1:LRP_t2,[1,3,5,7]),3),1)),'b','linewidth',2);
plot([0 0],[-4 4],'k:'); plot([-1000 500],[0 0],'k:');
plot([-300 -300],[-2 2],'c'); plot([-150 -150],[-2 2],'c'); 
plot([-150 -150],[-2 2],'c'); plot([-50 -50],[-2 2],'c');
title('LRP')


%% REPEAT vs. SWITCH

figure; 
site=19;
subplot(4,1,1); hold on
plot(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,site,t1:t2,1:4),4),1)),'k','linewidth',2);
plot(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,site,t1:t2,5:8),4),1)),'g','linewidth',2);
shadedErrorBar(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,site,t1:t2,1:4),4),1)),squeeze(std(mean(MEGA_ERP_minsize(:,site,t1:t2,1:4),4),1))./sqrt(BigN),'k');
shadedErrorBar(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,site,t1:t2,5:8),4),1)),squeeze(std(mean(MEGA_ERP_minsize(:,site,t1:t2,5:8),4),1))./sqrt(BigN),'g');
plot(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,site,t1:t2,1:4),4),1)),'k','linewidth',2);
plot(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,site,t1:t2,5:8),4),1)),'g','linewidth',2);
plot(mean(mean(RT(:,1:4))),[10],'ko'); 
plot(mean(mean(RT(:,5:8))),[10],'go');
plot([0 0],[-5 15],'k:'); plot([-500 1000],[0 0],'k:');
% plot([P2 P2],[-5 15],'m'); plot([P2-10 P2-10],[-5 15],'c'); plot([P2+10 P2+10],[-5 15],'c'); text(P2,-5,'P2');
plot([N2 N2],[-5 15],'m'); plot([N2-20 N2-20],[-5 15],'c'); plot([N2+20 N2+20],[-5 15],'c'); text(N2,-5,'N2');
title('FCz')
legend({'REPEAT','SWITCH'})

subplot(4,1,2); hold on
site=28;
shadedErrorBar(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,site,t1:t2,1:4),4),1)),squeeze(std(mean(MEGA_ERP_minsize(:,site,t1:t2,1:4),4),1))./sqrt(BigN),'k');
shadedErrorBar(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,site,t1:t2,5:8),4),1)),squeeze(std(mean(MEGA_ERP_minsize(:,site,t1:t2,5:8),4),1))./sqrt(BigN),'g');
plot(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,site,t1:t2,1:4),4),1)),'k','linewidth',2);
plot(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,site,t1:t2,5:8),4),1)),'g','linewidth',2);
plot(mean(mean(RT(:,1:4))),[10],'ko'); 
plot(mean(mean(RT(:,5:8))),[10],'go');
plot([0 0],[-5 15],'k:'); plot([-500 1000],[0 0],'k:');
%plot([P2 P2],[-5 15],'m'); plot([P2-10 P2-10],[-5 15],'c'); plot([P2+10 P2+10],[-5 15],'c'); text(P2,-5,'P2');
%plot([N2 N2],[-5 15],'m'); plot([N2-20 N2-20],[-5 15],'c'); plot([N2+20 N2+20],[-5 15],'c'); text(N2,-5,'N2');
plot([P3 P3],[-5 15],'m'); plot([P3-P3range P3-P3range],[-5 15],'c'); plot([P3+P3range P3+P3range],[-5 15],'c'); text(P3,-5,'P3');
title('Cz')

subplot(4,1,3); hold on
site=46;
shadedErrorBar(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,site,t1:t2,1:4),4),1)),squeeze(std(mean(MEGA_ERP_minsize(:,site,t1:t2,1:4),4),1))./sqrt(BigN),'k');
shadedErrorBar(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,site,t1:t2,5:8),4),1)),squeeze(std(mean(MEGA_ERP_minsize(:,site,t1:t2,5:8),4),1))./sqrt(BigN),'g');
plot(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,site,t1:t2,1:4),4),1)),'k','linewidth',2);
plot(tx2disp,squeeze(mean(mean(MEGA_ERP_minsize(:,site,t1:t2,5:8),4),1)),'g','linewidth',2);
plot(mean(mean(RT(:,1:4))),[10],'ko'); 
plot(mean(mean(RT(:,5:8))),[10],'go');
plot([0 0],[-5 15],'k:'); plot([-500 1000],[0 0],'k:');
plot([P3 P3],[-5 15],'m'); plot([P3-P3range P3-P3range],[-5 15],'c'); plot([P3+P3range P3+P3range],[-5 15],'c'); text(P3,-5,'P3');
plot([LATE LATE],[-5 15],'m'); plot([LATE-LATErange LATE-LATErange],[-5 15],'c'); plot([LATE+LATErange LATE+LATErange],[-5 15],'c'); text(LATE,-5,'LATE');
title('Pz')

subplot(4,1,4); hold on
tx=-2000:2:1998;
LRP_t1=find(tx==-1000);  LRP_t2=find(tx==500);
LRP_tx2disp=-1000:2:500;
shadedErrorBar(LRP_tx2disp,squeeze(mean(mean(MEGA_ERP_LRP_minsize(:,LRP_t1:LRP_t2,1:4),3),1)),squeeze(std(mean(MEGA_ERP_LRP_minsize(:,LRP_t1:LRP_t2,1:4),3),1))./sqrt(BigN),'k');
shadedErrorBar(LRP_tx2disp,squeeze(mean(mean(MEGA_ERP_LRP_minsize(:,LRP_t1:LRP_t2,5:8),3),1)),squeeze(std(mean(MEGA_ERP_LRP_minsize(:,LRP_t1:LRP_t2,5:8),3),1))./sqrt(BigN),'g');
plot(LRP_tx2disp,squeeze(mean(mean(MEGA_ERP_LRP_minsize(:,LRP_t1:LRP_t2,1:4),3),1)),'k','linewidth',2);
plot(LRP_tx2disp,squeeze(mean(mean(MEGA_ERP_LRP_minsize(:,LRP_t1:LRP_t2,5:8),3),1)),'g','linewidth',2);
plot([0 0],[-4 4],'k:'); plot([-1000 500],[0 0],'k:');
plot([-300 -300],[-2 2],'c'); plot([-150 -150],[-2 2],'c'); 
plot([-150 -150],[-2 2],'c'); plot([-50 -50],[-2 2],'c');
title('LRP')



%% Get ROIs

SITE=[19,28,46];
for ai=1:3 % SITE=[FCz,Cz,Pz]
    for bi=1:4 % TIMES=[P2,N2,P3,LATE];
        for ci=1:8
            MEANS(:,ai,bi,ci)=squeeze(mean(MEGA_ERP_minsize(:,SITE(ai),TIMEWINS{bi},ci),3));
        end
    end
end

TIMEWINS_LAT=find(tx==P3)-(P3range/2):find(tx==P3)+(P3range/2) ;  % 300 to 600
P3actuallatency=P3-P3range:2:P3+P3range;
for si=1:size(MEGA_ERP_minsize,1)
    for ai=1:3 % SITE=[FCz,Cz,Pz]
        for ci=1:8
            idx=find(squeeze(MEGA_ERP_minsize(si,SITE(ai),TIMEWINS_LAT,ci))==max(squeeze(MEGA_ERP_minsize(si,SITE(ai),TIMEWINS_LAT,ci))));
            P3Latency(si,ai,ci)=P3actuallatency(idx);
        end
    end
end

%%
% % % % % Major cue-locked components were defined as the mean activity over the following windows and electrodes: 
% % % % N2 (FCz: 275 +/- 20 ms), 
% % % % P3 (Pz: 450 +/- 150 ms), 
% % % % Slow wave (Pz, 700 +/- 250 ms), 
% % % % additionally P3 peak times were quantified at the P3 window and electrode. 
% % % % Response-locked LRP components were defined as the pre-LRP (-300 to -150 ms) and the LRP slope (-50 ms minus -150 ms).

clear ERPmean;

CHAN=3  ;% SITE=[FCz,Cz,Pz]
TIME=4  ;% TIMES=[P2,N2,P3,LATE];
ERPmean=squeeze(mean(MEANS(:,CHAN,TIME,:),2));  % -squeeze(MEANS(:,CHAN,2,:)); %     

%  ERPmean=squeeze(mean(P3Latency(:,3,:),2));   

%%
clear ERPmean;

lrp1=find(tx==-300);
lrp2=find(tx==-150);
lrp3=find(tx==-50);

% ERPmean=-1* (squeeze(mean(MEGA_ERP_LRP_minsize(:,lrp3,:),2))-squeeze(mean(MEGA_ERP_LRP_minsize(:,lrp2,:),2)) ); LRP_TITLE='LRP SLOPE';      
ERPmean=squeeze(mean(MEGA_ERP_LRP_minsize(:,lrp1:lrp2,:),2)); LRP_TITLE='PRE-LRP';