| # environment variables for model training | |
| # environment variables for the inference api | |
| export DATA_DIR=queries | |
| export PATCHES_DIR=${DATA_DIR}/patches | |
| export SLIDES_DIR=${DATA_DIR}/slides | |
| export GRAPHCAM_DIR=${DATA_DIR}/graphcam_plots | |
| mkdir $GRAPHCAM_DIR -p | |
| # manually put the metadata in the metadata folder | |
| export CLASS_METADATA='metadata/label_map.pkl' | |
| # manually put the desired weights in the weights folder | |
| export WEIGHTS_PATH='weights' | |
| export FEATURE_EXTRACTOR_WEIGHT_PATH=${WEIGHTS_PATH}/feature_extractor/model.pth | |
| export GT_WEIGHT_PATH=${WEIGHTS_PATH}/graph_transformer/GraphCAM.pth |