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Erva Ulusoy
commited on
Commit
·
8fa6245
1
Parent(s):
4bd44bb
Update run_domain2go_app.py
Browse files- run_domain2go_app.py +3 -2
run_domain2go_app.py
CHANGED
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@@ -73,8 +73,9 @@ def find_domains(email, sequence, name):
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entries[entry['accession']]['locations'] = list(set(entries[entry['accession']]['locations']))
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# sort locations by both start and end position
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# entries[entry['accession']]['locations'] = sorted(entries[entry['accession']]['locations'], key=lambda x:
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entries[entry['accession']]['locations'] = sorted(entries[entry['accession']]['locations'], key=lambda x: int(x
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entries[entry['accession']]['locations'] = '|'.join(entries[entry['accession']]['locations'])
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if entries:
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entries[entry['accession']]['locations'] = list(set(entries[entry['accession']]['locations']))
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# sort locations by both start and end position
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# entries[entry['accession']]['locations'] = sorted(entries[entry['accession']]['locations'], key=lambda x: int(x.split('-')[0]))
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entries[entry['accession']]['locations'] = sorted([i.split('-') for i in entries[entry['accession']]['locations']], key=lambda x: (int(x[0]), int(x[1])))
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+
entries[entry['accession']]['locations'] = ['-'.join(i) for i in entries[entry['accession']]['locations']]
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entries[entry['accession']]['locations'] = '|'.join(entries[entry['accession']]['locations'])
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if entries:
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