Spaces:
Running
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CPU Upgrade
Running
on
CPU Upgrade
Andrew Stirn
commited on
Commit
·
6db3004
1
Parent(s):
6e3a126
streamlit titration support
Browse files
app.py
CHANGED
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@@ -35,6 +35,7 @@ def initiate_run():
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st.session_state.transcripts = None
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st.session_state.input_error = None
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st.session_state.on_target = None
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st.session_state.off_target = None
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# initialize transcript DataFrame
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@@ -90,6 +91,8 @@ if __name__ == '__main__':
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st.session_state.input_error = None
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if 'on_target' not in st.session_state:
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st.session_state.on_target = None
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if 'off_target' not in st.session_state:
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st.session_state.off_target = None
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@@ -159,6 +162,20 @@ if __name__ == '__main__':
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else:
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on_target_results.empty()
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# off-target results
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off_target_results = st.empty()
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if st.session_state.off_target is not None:
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@@ -178,7 +195,7 @@ if __name__ == '__main__':
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# keep trying to run model until we clear inputs (streamlit UI changes can induce race-condition reruns)
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if st.session_state.transcripts is not None:
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-
st.session_state.on_target, st.session_state.off_target = tiger.tiger_exhibit(
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transcripts=st.session_state.transcripts,
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mode={v: k for k, v in tiger.RUN_MODES.items()}[st.session_state.mode],
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check_off_targets=st.session_state.check_off_targets,
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st.session_state.transcripts = None
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st.session_state.input_error = None
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st.session_state.on_target = None
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st.session_state.titration = None
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st.session_state.off_target = None
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# initialize transcript DataFrame
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st.session_state.input_error = None
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if 'on_target' not in st.session_state:
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st.session_state.on_target = None
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if 'titration' not in st.session_state:
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st.session_state.titration = None
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if 'off_target' not in st.session_state:
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st.session_state.off_target = None
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else:
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on_target_results.empty()
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# titration results
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titration_results = st.empty()
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if st.session_state.titration is not None:
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with titration_results.container():
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st.write('Titration predictions:', st.session_state.titration)
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st.download_button(
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label='Download titration predictions',
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data=convert_df(st.session_state.titration),
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file_name='titration.csv',
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mime='text/csv'
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)
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else:
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titration_results.empty()
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# off-target results
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off_target_results = st.empty()
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if st.session_state.off_target is not None:
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# keep trying to run model until we clear inputs (streamlit UI changes can induce race-condition reruns)
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if st.session_state.transcripts is not None:
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st.session_state.on_target, st.session_state.titration, st.session_state.off_target = tiger.tiger_exhibit(
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transcripts=st.session_state.transcripts,
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mode={v: k for k, v in tiger.RUN_MODES.items()}[st.session_state.mode],
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check_off_targets=st.session_state.check_off_targets,
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