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tiger

Running on CPU Upgrade

Andrew Stirn commited on Jul 8, 2023

Commit

ccfd7e1

1 Parent(s): 546d4e5

small bug from last commit

Files changed (1) hide show

tiger.py CHANGED Viewed

@@ -251,7 +251,7 @@ def find_off_targets(top_guides: pd.DataFrame, status_update_fn=None):
                     target = target + 'N' * (TARGET_LEN - len(target))
                 else:
                     target = target[start_location - CONTEXT_5P:start_location + GUIDE_LEN + CONTEXT_3P]
-                if row[MM_COL] == 0 and 'N' not in row[TARGET_COL]:
                     assert row[GUIDE_COL] == sequence_complement([target[CONTEXT_5P:TARGET_LEN - CONTEXT_3P]])[0]
                 row[TARGET_COL] = target

                     target = target + 'N' * (TARGET_LEN - len(target))
                 else:
                     target = target[start_location - CONTEXT_5P:start_location + GUIDE_LEN + CONTEXT_3P]
+                if row[MM_COL] == 0 and 'N' not in target:
                     assert row[GUIDE_COL] == sequence_complement([target[CONTEXT_5P:TARGET_LEN - CONTEXT_3P]])[0]
                 row[TARGET_COL] = target