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Update inference_app.py
Browse files- inference_app.py +5 -2
inference_app.py
CHANGED
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@@ -12,9 +12,11 @@ def predict (input_sequence, input_ligand,input_msa, input_protein):
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start_time = time.time()
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# Do inference here
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# return an output pdb file with the protein and ligand with resname LIG or UNK.
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end_time = time.time()
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run_time = end_time - start_time
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return ["test_out.pdb", "test_docking_pose.sdf"], run_time
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with gr.Blocks() as app:
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@@ -63,8 +65,9 @@ with gr.Blocks() as app:
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]
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out = Molecule3D(reps=reps)
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run_time = gr.Textbox(label="Runtime")
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btn.click(predict, inputs=[input_sequence, input_ligand, input_msa, input_protein], outputs=[out, run_time])
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app.launch()
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start_time = time.time()
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# Do inference here
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# return an output pdb file with the protein and ligand with resname LIG or UNK.
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# also return any metrics you want to log, metrics will not be used for evaluation but might be useful for users
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metrics = {"mean_plddt": 80, "binding_affinity": -2}
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end_time = time.time()
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run_time = end_time - start_time
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return ["test_out.pdb", "test_docking_pose.sdf"], metrics, run_time
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with gr.Blocks() as app:
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]
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out = Molecule3D(reps=reps)
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metrics = gr.JSON(label="Metrics")
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run_time = gr.Textbox(label="Runtime")
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btn.click(predict, inputs=[input_sequence, input_ligand, input_msa, input_protein], outputs=[out,metrics, run_time])
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app.launch()
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