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Running
Running
Commit
·
a06bfc4
1
Parent(s):
5b978f9
Create torch export function
Browse files- pysr/__init__.py +1 -0
- pysr/export_torch.py +172 -0
- pysr/sr.py +1 -0
pysr/__init__.py
CHANGED
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@@ -1,3 +1,4 @@
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from .sr import pysr, get_hof, best, best_tex, best_callable, best_row
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from .feynman_problems import Problem, FeynmanProblem
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from .export_jax import sympy2jax
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from .sr import pysr, get_hof, best, best_tex, best_callable, best_row
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from .feynman_problems import Problem, FeynmanProblem
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from .export_jax import sympy2jax
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from .export_torch import sympy2torch
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pysr/export_torch.py
ADDED
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@@ -0,0 +1,172 @@
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#####
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# From https://github.com/patrick-kidger/sympytorch
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# Copied here to allow PySR-specific tweaks
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#####
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import collections as co
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import functools as ft
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import sympy
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import torch
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def _reduce(fn):
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def fn_(*args):
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return ft.reduce(fn, args)
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return fn_
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_global_func_lookup = {
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sympy.Mul: _reduce(torch.mul),
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sympy.Add: _reduce(torch.add),
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sympy.div: torch.div,
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sympy.Abs: torch.abs,
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sympy.sign: torch.sign,
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# Note: May raise error for ints.
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sympy.ceiling: torch.ceil,
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sympy.floor: torch.floor,
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sympy.log: torch.log,
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sympy.exp: torch.exp,
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sympy.sqrt: torch.sqrt,
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sympy.cos: torch.cos,
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sympy.acos: torch.acos,
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sympy.sin: torch.sin,
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sympy.asin: torch.asin,
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sympy.tan: torch.tan,
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sympy.atan: torch.atan,
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sympy.atan2: torch.atan2,
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# Note: May give NaN for complex results.
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sympy.cosh: torch.cosh,
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sympy.acosh: torch.acosh,
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sympy.sinh: torch.sinh,
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sympy.asinh: torch.asinh,
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sympy.tanh: torch.tanh,
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sympy.atanh: torch.atanh,
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sympy.Pow: torch.pow,
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sympy.re: torch.real,
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sympy.im: torch.imag,
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sympy.arg: torch.angle,
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# Note: May raise error for ints and complexes
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sympy.erf: torch.erf,
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sympy.loggamma: torch.lgamma,
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sympy.Eq: torch.eq,
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sympy.Ne: torch.ne,
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sympy.StrictGreaterThan: torch.gt,
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sympy.StrictLessThan: torch.lt,
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sympy.LessThan: torch.le,
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sympy.GreaterThan: torch.ge,
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sympy.And: torch.logical_and,
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sympy.Or: torch.logical_or,
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sympy.Not: torch.logical_not,
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sympy.Max: torch.max,
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sympy.Min: torch.min,
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# Matrices
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sympy.MatAdd: torch.add,
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sympy.HadamardProduct: torch.mul,
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sympy.Trace: torch.trace,
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# Note: May raise error for integer matrices.
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sympy.Determinant: torch.det,
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}
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class _Node(torch.nn.Module):
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def __init__(self, *, expr, _memodict, _func_lookup, **kwargs):
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super().__init__(**kwargs)
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self._sympy_func = expr.func
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if issubclass(expr.func, sympy.Float):
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self._value = torch.nn.Parameter(torch.tensor(float(expr)))
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self._torch_func = lambda: self._value
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self._args = ()
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elif issubclass(expr.func, sympy.UnevaluatedExpr):
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if len(expr.args) != 1 or not issubclass(expr.args[0].func, sympy.Float):
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raise ValueError("UnevaluatedExpr should only be used to wrap floats.")
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self.register_buffer('_value', torch.tensor(float(expr.args[0])))
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self._torch_func = lambda: self._value
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self._args = ()
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elif issubclass(expr.func, sympy.Integer):
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# Can get here if expr is one of the Integer special cases,
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# e.g. NegativeOne
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self._value = int(expr)
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self._torch_func = lambda: self._value
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self._args = ()
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elif issubclass(expr.func, sympy.Symbol):
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self._name = expr.name
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self._torch_func = lambda value: value
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self._args = ((lambda memodict: memodict[expr.name]),)
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else:
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self._torch_func = _func_lookup[expr.func]
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args = []
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for arg in expr.args:
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try:
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arg_ = _memodict[arg]
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except KeyError:
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arg_ = type(self)(expr=arg, _memodict=_memodict, _func_lookup=_func_lookup, **kwargs)
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_memodict[arg] = arg_
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args.append(arg_)
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self._args = torch.nn.ModuleList(args)
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def sympy(self, _memodict):
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if issubclass(self._sympy_func, sympy.Float):
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return self._sympy_func(self._value.item())
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elif issubclass(self._sympy_func, sympy.UnevaluatedExpr):
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return self._sympy_func(self._value.item())
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elif issubclass(self._sympy_func, sympy.Integer):
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return self._sympy_func(self._value)
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elif issubclass(self._sympy_func, sympy.Symbol):
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return self._sympy_func(self._name)
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else:
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if issubclass(self._sympy_func, (sympy.Min, sympy.Max)):
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evaluate = False
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else:
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evaluate = True
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args = []
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for arg in self._args:
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try:
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arg_ = _memodict[arg]
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except KeyError:
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arg_ = arg.sympy(_memodict)
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_memodict[arg] = arg_
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args.append(arg_)
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return self._sympy_func(*args, evaluate=evaluate)
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def forward(self, memodict):
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args = []
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for arg in self._args:
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try:
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arg_ = memodict[arg]
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except KeyError:
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arg_ = arg(memodict)
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memodict[arg] = arg_
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args.append(arg_)
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return self._torch_func(*args)
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class SingleSymPyModule(torch.nn.Module):
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def __init__(self, expression, symbols_in,
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extra_funcs=None, **kwargs):
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super().__init__(**kwargs)
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if extra_funcs is None:
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extra_funcs = {}
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_func_lookup = co.ChainMap(_global_func_lookup, extra_funcs)
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_memodict = {}
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self._node = _Node(expr=expression, _memodict=_memodict, _func_lookup=_func_lookup)
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self._expression_string = str(expression)
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self.symbols_in = [str(symbol) for symbol in symbols_in]
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def __repr__(self):
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return f"{type(self).__name__}(expression={self._expression_string})"
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def sympy(self):
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_memodict = {}
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return self._node.sympy(_memodict)
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def forward(self, X):
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symbols = {symbol: X[:, i]
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for i, symbol in enumerate(self.symbols_in)}
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return self._node(symbols)
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def sympy2torch(expression, symbols_in):
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return SingleSymPyModule(expression, symbols_in)
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pysr/sr.py
CHANGED
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@@ -14,6 +14,7 @@ from pathlib import Path
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from datetime import datetime
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import warnings
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from .export_jax import sympy2jax
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global_equation_file = 'hall_of_fame.csv'
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global_n_features = None
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from datetime import datetime
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import warnings
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from .export_jax import sympy2jax
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from .export_torch import sympy2torch
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global_equation_file = 'hall_of_fame.csv'
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global_n_features = None
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