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# src/ui_components_original.py
import gradio as gr
import os
import re
import logging
import base64
from datetime import datetime
from PIL import Image
import html
from typing import Optional, Dict, Any
import numpy as np
import cv2
import tempfile
# ---- Safe imports for local vs package execution ----
try:
from .patient_history import PatientHistoryManager, ReportGenerator
except Exception:
from patient_history import PatientHistoryManager, ReportGenerator # local dev
# ---- Optional spaces.GPU fallback (local dev) ----
try:
import spaces
def _SPACES_GPU(*args, **kwargs):
return spaces.GPU(*args, **kwargs)
except Exception:
def _SPACES_GPU(*_args, **_kwargs):
def deco(f):
return f
return deco
logging.basicConfig(level=logging.INFO, format="%(asctime)s - %(levelname)s - %(message)s")
def pil_to_base64(pil_image: Image.Image) -> Optional[str]:
"""Convert PIL Image to base64 data URL"""
import io
if pil_image is None:
return None
try:
if pil_image.mode != 'RGB':
pil_image = pil_image.convert('RGB')
buffer = io.BytesIO()
pil_image.save(buffer, format='PNG')
img_str = base64.b64encode(buffer.getvalue()).decode()
return f"data:image/png;base64,{img_str}"
except Exception as e:
logging.error(f"Error converting PIL image to base64: {e}")
return None
# =============================================================================
# GPU-DECORATED FUNCTION (STANDALONE)
# =============================================================================
@_SPACES_GPU(enable_queue=True)
def standalone_run_analysis(
# instance/context
ui_instance,
current_user: Dict[str, Any],
database_manager,
wound_analyzer,
# UI inputs
mode, existing_label,
np_name, np_age, np_gender,
w_loc, w_dur, pain, moist, infect, diabetic,
prev_tx, med_hist, meds, alls, notes, img_path
, seg_adjust=0.0, manual_mask=None
):
"""Runs in the ZeroGPU worker; returns HTML for the UI."""
def _label_to_id(label: str):
if not label:
return None
try:
return int(str(label).split("•", 1)[0].strip())
except Exception:
return None
def _fetch_patient_core(pid: int):
row = database_manager.execute_query_one(
"SELECT id, name, age, gender FROM patients WHERE id=%s LIMIT 1", (pid,)
)
return row or {}
def _response_to_patient_id(resp_ref):
if isinstance(resp_ref, dict):
pid = resp_ref.get("patient_id")
if pid is not None:
try:
return int(pid)
except Exception:
pass
resp_id = resp_ref.get("response_id") or resp_ref.get("id")
else:
resp_id = resp_ref
if not resp_id:
return None
row = database_manager.execute_query_one(
"SELECT patient_id FROM questionnaire_responses WHERE id=%s LIMIT 1",
(int(resp_id),)
)
try:
return int(row["patient_id"]) if row and "patient_id" in row else None
except Exception:
return None
try:
if not img_path:
return "<div class='status-error'>❌ Please upload a wound image.</div>"
user_id = int(current_user.get("id", 0) or 0)
if not user_id:
return "<div class='status-error'>❌ Please login first.</div>"
# Resolve patient
if mode == "Existing patient":
pid = _label_to_id(existing_label)
if not pid:
return "<div class='status-warning'>⚠️ Select an existing patient.</div>"
pcore = _fetch_patient_core(pid)
patient_name_v = pcore.get("name")
patient_age_v = pcore.get("age")
patient_gender_v = pcore.get("gender")
else:
patient_name_v = np_name
patient_age_v = np_age
patient_gender_v = np_gender
# Save questionnaire
q_payload = {
'user_id': user_id,
'patient_name': patient_name_v,
'patient_age': patient_age_v,
'patient_gender': patient_gender_v,
'wound_location': w_loc,
'wound_duration': w_dur,
'pain_level': pain,
'moisture_level': moist,
'infection_signs': infect,
'diabetic_status': diabetic,
'previous_treatment': prev_tx,
'medical_history': med_hist,
'medications': meds,
'allergies': alls,
'additional_notes': notes
}
response_id = database_manager.save_questionnaire(q_payload)
# normalize
response_id = (response_id.get("response_id") if isinstance(response_id, dict) else response_id)
try:
response_id = int(response_id)
except Exception:
return "<div class='status-error'>❌ Could not resolve response ID.</div>"
patient_id = _response_to_patient_id(response_id)
if not patient_id:
return "<div class='status-error'>❌ Could not resolve patient ID.</div>"
# Save wound image binary
try:
with Image.open(img_path) as pil:
pil = pil.convert("RGB")
img_meta = database_manager.save_wound_image(patient_id, pil)
image_db_id = img_meta["id"] if img_meta else None
except Exception as e:
logging.error(f"save_wound_image error: {e}")
image_db_id = None
# Prepare AI inputs
q_for_ai = {
'age': patient_age_v,
'diabetic': 'Yes' if diabetic != 'Non-diabetic' else 'No',
'allergies': alls,
'date_of_injury': 'Unknown',
'professional_care': 'Yes',
'oozing_bleeding': 'Minor Oozing' if infect != 'None' else 'None',
'infection': 'Yes' if infect != 'None' else 'No',
'moisture': moist,
'patient_name': patient_name_v,
'patient_gender': patient_gender_v,
'wound_location': w_loc,
'wound_duration': w_dur,
'pain_level': pain,
'previous_treatment': prev_tx,
'medical_history': med_hist,
'medications': meds,
'additional_notes': notes
}
# Run AI with optional segmentation adjustment and manual mask
analysis_result = wound_analyzer.analyze_wound(
img_path,
q_for_ai,
seg_adjust=seg_adjust or 0.0,
manual_mask_path=manual_mask if manual_mask else None
)
if not analysis_result or not analysis_result.get("success"):
err = (analysis_result or {}).get("error", "Unknown analysis error")
return f"<div class='status-error'>❌ AI Analysis failed: {html.escape(str(err))}</div>"
# Persist AI analysis
try:
database_manager.save_analysis(response_id, image_db_id, analysis_result)
except Exception as e:
logging.error(f"save_analysis error: {e}")
# Format via instance method to keep UI consistent
return ui_instance._format_comprehensive_analysis_results(
analysis_result, img_path, q_for_ai
)
except Exception as e:
logging.exception("standalone_run_analysis exception")
return f"<div class='status-error'>❌ System error in GPU worker: {html.escape(str(e))}</div>"
# =============================================================================
# UI CLASS DEFINITION
# =============================================================================
class UIComponents:
def __init__(self, auth_manager, database_manager, wound_analyzer):
self.auth_manager = auth_manager
self.database_manager = database_manager
self.wound_analyzer = wound_analyzer
self.current_user = {}
self.patient_history_manager = PatientHistoryManager(database_manager)
self.report_generator = ReportGenerator()
# Ensure uploads directory exists
if not os.path.exists("uploads"):
os.makedirs("uploads", exist_ok=True)
def image_to_base64(self, image_path):
"""Convert image to base64 data URL for embedding in HTML"""
if not image_path or not os.path.exists(image_path):
return None
try:
with open(image_path, "rb") as image_file:
encoded_string = base64.b64encode(image_file.read()).decode()
image_ext = os.path.splitext(image_path)[1].lower()
if image_ext in [".jpg", ".jpeg"]:
mime_type = "image/jpeg"
elif image_ext == ".png":
mime_type = "image/png"
elif image_ext == ".gif":
mime_type = "image/gif"
else:
mime_type = "image/png"
return f"data:{mime_type};base64,{encoded_string}"
except Exception as e:
logging.error(f"Error converting image to base64: {e}")
return None
def markdown_to_html(self, markdown_text):
"""Convert markdown text to proper HTML format with enhanced support"""
if not markdown_text:
return ""
# Escape HTML entities
html_text = html.escape(markdown_text)
# Headers
html_text = re.sub(r"^### (.*?)$", r"<h3>\1</h3>", html_text, flags=re.MULTILINE)
html_text = re.sub(r"^## (.*?)$", r"<h2>\1</h2>", html_text, flags=re.MULTILINE)
html_text = re.sub(r"^# (.*?)$", r"<h1>\1</h1>", html_text, flags=re.MULTILINE)
# Bold, italic
html_text = re.sub(r"\*\*(.*?)\*\*", r"<strong>\1</strong>", html_text)
html_text = re.sub(r"\*(.*?)\*", r"<em>\1</em>", html_text)
# Code blocks
html_text = re.sub(r"```(.*?)```", r"<pre><code>\1</code></pre>", html_text, flags=re.DOTALL)
# Inline code
html_text = re.sub(r"`(.*?)`", r"<code>\1</code>", html_text)
# Blockquotes
html_text = re.sub(r"^> (.*?)$", r"<blockquote>\1</blockquote>", html_text, flags=re.MULTILINE)
# Links
html_text = re.sub(r"\[(.*?)\]\((.*?)\)", r"<a href=\"\2\">\1</a>", html_text)
# Horizontal rules
html_text = re.sub(r"^\s*[-*_]{3,}\s*$", r"<hr>", html_text, flags=re.MULTILINE)
# Bullet points to <ul>
lines = html_text.split("\n")
in_list = False
result_lines = []
for line in lines:
stripped = line.strip()
if stripped.startswith("- "):
if not in_list:
result_lines.append("<ul>")
in_list = True
result_lines.append(f"<li>{stripped[2:]}</li>")
else:
if in_list:
result_lines.append("</ul>")
in_list = False
if stripped:
result_lines.append(f"<p>{stripped}</p>")
else:
result_lines.append("<br>")
if in_list:
result_lines.append("</ul>")
return "\n".join(result_lines)
def get_organizations_dropdown(self):
"""Get list of organizations for dropdown"""
try:
organizations = self.database_manager.get_organizations()
return [f"{org['org_name']} - {org['location']}" for org in organizations]
except Exception as e:
logging.error(f"Error getting organizations: {e}")
return ["Default Hospital - Location"]
def get_custom_css(self):
return """
/* =================== SMARTHEAL CSS =================== */
/* Global Styling */
body, html {
margin: 0 !important;
padding: 0 !important;
font-family: 'Inter', -apple-system, BlinkMacSystemFont, 'Segoe UI', 'Roboto', 'Oxygen', 'Ubuntu', 'Cantarell', sans-serif !important;
background: linear-gradient(135deg, #f5f7fa 0%, #c3cfe2 100%) !important;
color: #1A202C !important;
line-height: 1.6 !important;
}
/* Professional Header with Logo */
.medical-header {
background: linear-gradient(135deg, #3182ce 0%, #2c5aa0 100%) !important;
color: white !important;
padding: 32px 40px !important;
border-radius: 20px 20px 0 0 !important;
display: flex !important;
align-items: center !important;
justify-content: center !important;
margin-bottom: 0 !important;
box-shadow: 0 10px 40px rgba(49, 130, 206, 0.3) !important;
border: none !important;
position: relative !important;
overflow: hidden !important;
}
.logo {
width: 80px !important;
height: 80px !important;
border-radius: 50% !important;
margin-right: 24px !important;
border: 4px solid rgba(255, 255, 255, 0.3) !important;
box-shadow: 0 8px 32px rgba(0, 0, 0, 0.2) !important;
background: white !important;
padding: 4px !important;
}
.medical-header h1 {
font-size: 3.5rem !important;
font-weight: 800 !important;
margin: 0 !important;
text-shadow: 2px 2px 8px rgba(0, 0, 0, 0.3) !important;
background: linear-gradient(45deg, #ffffff, #f8f9fa) !important;
-webkit-background-clip: text !important;
-webkit-text-fill-color: transparent !important;
background-clip: text !important;
filter: drop-shadow(2px 2px 4px rgba(0, 0, 0, 0.3)) !important;
}
.medical-header p {
font-size: 1.3rem !important;
margin: 8px 0 0 0 !important;
opacity: 0.95 !important;
font-weight: 500 !important;
text-shadow: 1px 1px 4px rgba(0, 0, 0, 0.2) !important;
}
/* Enhanced Form Styling */
.gr-form {
background: linear-gradient(145deg, #ffffff 0%, #f8f9fa 100%) !important;
border-radius: 20px !important;
padding: 32px !important;
margin: 24px 0 !important;
box-shadow: 0 16px 48px rgba(0, 0, 0, 0.1) !important;
border: 1px solid rgba(229, 62, 62, 0.1) !important;
backdrop-filter: blur(10px) !important;
position: relative !important;
overflow: hidden !important;
}
/* Professional Input Fields */
.gr-textbox, .gr-number {
border-radius: 12px !important;
border: 2px solid #E2E8F0 !important;
background: #FFFFFF !important;
transition: all 0.3s cubic-bezier(0.4, 0, 0.2, 1) !important;
box-shadow: 0 2px 8px rgba(0, 0, 0, 0.05) !important;
font-size: 1rem !important;
color: #1A202C !important;
padding: 16px 20px !important;
}
.gr-textbox:focus, .gr-number:focus, .gr-textbox input:focus, .gr-number input:focus {
border-color: #E53E3E !important;
box-shadow: 0 0 0 4px rgba(229, 62, 62, 0.1) !important;
background: #FFFFFF !important;
outline: none !important;
transform: translateY(-1px) !important;
}
/* Enhanced Button Styling */
button.gr-button, button.gr-button-primary {
background: linear-gradient(135deg, #E53E3E 0%, #C53030 100%) !important;
color: #FFFFFF !important;
border: none !important;
border-radius: 12px !important;
font-weight: 700 !important;
padding: 16px 32px !important;
font-size: 1.1rem !important;
letter-spacing: 0.5px !important;
text-align: center !important;
transition: all 0.3s cubic-bezier(0.4, 0, 0.2, 1) !important;
box-shadow: 0 4px 16px rgba(229, 62, 62, 0.3) !important;
position: relative !important;
overflow: hidden !important;
text-transform: uppercase !important;
cursor: pointer !important;
}
button.gr-button:hover, button.gr-button-primary:hover {
background: linear-gradient(135deg, #C53030 0%, #9C2A2A 100%) !important;
box-shadow: 0 8px 32px rgba(229, 62, 62, 0.4) !important;
transform: translateY(-3px) !important;
}
/* Professional Status Messages */
.status-success {
background: linear-gradient(135deg, #F0FFF4 0%, #E6FFFA 100%) !important;
border: 2px solid #38A169 !important;
color: #22543D !important;
padding: 20px 24px !important;
border-radius: 16px !important;
font-weight: 600 !important;
margin: 16px 0 !important;
box-shadow: 0 8px 24px rgba(56, 161, 105, 0.2) !important;
backdrop-filter: blur(10px) !important;
}
.status-error {
background: linear-gradient(135deg, #FFF5F5 0%, #FED7D7 100%) !important;
border: 2px solid #E53E3E !important;
color: #742A2A !important;
padding: 20px 24px !important;
border-radius: 16px !important;
font-weight: 600 !important;
margin: 16px 0 !important;
box-shadow: 0 8px 24px rgba(229, 62, 62, 0.2) !important;
backdrop-filter: blur(10px) !important;
}
.status-warning {
background: linear-gradient(135deg, #FFFBEB 0%, #FEF3C7 100%) !important;
border: 2px solid #F59E0B !important;
color: #92400E !important;
padding: 20px 24px !important;
border-radius: 16px !important;
font-weight: 600 !important;
margin: 16px 0 !important;
box-shadow: 0 8px 24px rgba(245, 158, 11, 0.2) !important;
backdrop-filter: blur(10px) !important;
}
/* Image Gallery */
.image-gallery {
display: grid !important;
grid-template-columns: repeat(auto-fit, minmax(300px, 1fr)) !important;
gap: 20px !important;
margin: 20px 0 !important;
}
.image-item {
background: white !important;
border-radius: 16px !important;
padding: 20px !important;
box-shadow: 0 8px 32px rgba(0, 0, 0, 0.1) !important;
transition: transform 0.3s ease !important;
}
.image-item:hover {
transform: translateY(-5px) !important;
box-shadow: 0 16px 48px rgba(0, 0, 0, 0.15) !important;
}
.image-item img {
width: 100% !important;
height: auto !important;
border-radius: 12px !important;
margin-bottom: 12px !important;
}
.image-item h4 {
color: #2D3748 !important;
margin: 0 0 8px 0 !important;
font-size: 1.2rem !important;
font-weight: 700 !important;
}
.image-item p {
color: #4A5568 !important;
margin: 0 !important;
font-size: 0.95rem !important;
line-height: 1.5 !important;
}
/* Responsive */
@media (max-width: 768px) {
.medical-header { padding: 16px !important; text-align: center !important; }
.medical-header h1 { font-size: 2rem !important; }
.logo { width: 48px !important; height: 48px !important; margin-right: 16px !important; }
.gr-form { padding: 16px !important; margin: 8px 0 !important; }
.image-gallery { grid-template-columns: 1fr; }
}
"""
def create_interface(self):
"""
SmartHeal UI – aligned with current DB + history manager:
• Login (practitioner / organization)
• Practitioner: Wound Analysis (existing vs new patient), Patient History, View Details
"""
import gradio as gr
from PIL import Image
import os, html, logging
# ----------------------- helpers (inner) -----------------------
self._patient_choices = [] # list[str] labels in dropdown
self._patient_map = {} # label -> patient_id
def _to_data_url_if_local(path_or_url: str) -> str:
if not path_or_url:
return ""
try:
if os.path.exists(path_or_url):
return self.image_to_base64(path_or_url) or ""
return path_or_url
except Exception:
return ""
def _refresh_patient_dropdown(user_id: int):
"""Query patient's list and prepare dropdown choices."""
self._patient_choices.clear()
self._patient_map.clear()
try:
rows = self.patient_history_manager.get_patient_list(user_id) or []
for r in rows:
pid = int(r.get("id") or 0)
nm = r.get("patient_name") or "Unknown"
age = r.get("patient_age") or ""
gen = r.get("patient_gender") or ""
v = int(r.get("total_visits") or 0)
label = f"{pid} • {nm} ({age}y {gen}) — visits: {v}"
self._patient_choices.append(label)
self._patient_map[label] = pid
except Exception as e:
logging.error(f"refresh dropdown error: {e}")
def _label_to_id(label: str):
if not label:
return None
try:
return int(str(label).split("•", 1)[0].strip())
except Exception:
return None
def _resolve_org_id_from_dropdown(label: str) -> Optional[int]:
"""
Dropdown items look like: 'Org Name - Location'.
Try to resolve to organizations.id.
"""
if not label:
return None
try:
if " - " in label:
org_name, location = label.split(" - ", 1)
row = self.database_manager.execute_query_one(
"SELECT id FROM organizations WHERE name=%s AND location=%s ORDER BY id DESC LIMIT 1",
(org_name.strip(), location.strip())
)
if row and "id" in row:
return int(row["id"])
else:
row = self.database_manager.execute_query_one(
"SELECT id FROM organizations WHERE name=%s ORDER BY id DESC LIMIT 1",
(label.strip(),)
)
if row and "id" in row:
return int(row["id"])
except Exception as e:
logging.error(f"resolve org id error: {e}")
return None
# ----------------------- Blocks UI -----------------------
with gr.Blocks(css=self.get_custom_css(), title="SmartHeal - AI Wound Care Assistant") as app:
# Header
logo_url = "https://scontent.fccu31-2.fna.fbcdn.net/v/t39.30808-6/275933824_102121829111657_3325198727201325354_n.jpg?_nc_cat=104&ccb=1-7&_nc_sid=6ee11a&_nc_ohc=5F0FMH9ni8QQ7kNvwHM_7v-&_nc_oc=AdnDo4fj3kdh7ShWq75N3ZEXKuGjbAu9-xZpx6bd82Vo4w0y6D-iHL64ETyW4lWod7s&_nc_zt=23&_nc_ht=scontent.fccu31-2.fna&_nc_gid=a4EiY054p4ChBMLqHCkaIA&oh=00_AfVn-aHeCy95qNhA--DhvjkWp6qdzowKpPRyJ8jevATOmQ&oe=68B1CF4B"
gr.HTML(f"""
<div class="medical-header">
<img src="{logo_url}" class="logo" alt="SmartHeal Logo">
<div>
<h1>SmartHeal AI</h1>
<p>Advanced Wound Care Analysis & Clinical Support System</p>
</div>
</div>
""")
# Disclaimer
gr.HTML("""
<div style="border:2px solid #FF6B6B;background:#FFE5E5;padding:15px;border-radius:12px;margin:10px 0;">
<h3 style="color:#D63031;margin:0 0 8px 0;">⚠️ IMPORTANT DISCLAIMER</h3>
<p><strong>This system is for testing/education and not a substitute for clinical judgment.</strong></p>
</div>
""")
# Panels: auth vs practitioner vs organization
with gr.Row():
with gr.Column(visible=True) as auth_panel:
with gr.Tabs():
with gr.Tab("🔐 Professional Login"):
login_username = gr.Textbox(label="👤 Username")
login_password = gr.Textbox(label="🔒 Password", type="password")
login_btn = gr.Button("🚀 Sign In", variant="primary")
login_status = gr.HTML("<div class='status-warning'>Please sign in.</div>")
with gr.Tab("📝 New Registration"):
signup_username = gr.Textbox(label="👤 Username")
signup_email = gr.Textbox(label="📧 Email")
signup_password = gr.Textbox(label="🔒 Password", type="password")
signup_name = gr.Textbox(label="👨⚕️ Full Name")
signup_role = gr.Radio(["practitioner", "organization"], label="Account Type", value="practitioner")
with gr.Group(visible=False) as org_fields:
org_name = gr.Textbox(label="Organization Name")
phone = gr.Textbox(label="Phone")
country_code = gr.Textbox(label="Country Code")
department = gr.Textbox(label="Department")
location = gr.Textbox(label="Location")
with gr.Group(visible=True) as prac_fields:
organization_dropdown = gr.Dropdown(choices=self.get_organizations_dropdown(), label="Select Organization")
signup_btn = gr.Button("✨ Create Account", variant="primary")
signup_status = gr.HTML()
with gr.Column(visible=False) as practitioner_panel:
user_info = gr.HTML("")
logout_btn_prac = gr.Button("🚪 Logout", variant="secondary")
with gr.Tabs():
# ------------------- WOUND ANALYSIS -------------------
with gr.Tab("🔬 Wound Analysis"):
with gr.Row():
with gr.Column(scale=1):
gr.HTML("<h3>📋 Patient Selection</h3>")
patient_mode = gr.Radio(
["Existing patient", "New patient"],
label="Patient mode",
value="Existing patient"
)
existing_patient_dd = gr.Dropdown(
choices=[],
label="Select existing patient (ID • Name)",
interactive=True
)
with gr.Group(visible=False) as new_patient_group:
new_patient_name = gr.Textbox(label="Patient Name")
new_patient_age = gr.Number(label="Age", value=30, minimum=0, maximum=120)
new_patient_gender = gr.Dropdown(choices=["Male", "Female", "Other"], value="Male", label="Gender")
gr.HTML("<h3>🩹 Wound Information</h3>")
wound_location = gr.Textbox(label="Wound Location", placeholder="e.g., Left ankle")
wound_duration = gr.Textbox(label="Wound Duration", placeholder="e.g., 2 weeks")
pain_level = gr.Slider(0, 10, value=5, step=1, label="Pain Level (0-10)")
gr.HTML("<h3>⚕️ Clinical Assessment</h3>")
moisture_level = gr.Dropdown(["Dry", "Moist", "Wet", "Saturated"], value="Moist", label="Moisture Level")
infection_signs = gr.Dropdown(["None", "Mild", "Moderate", "Severe"], value="None", label="Signs of Infection")
diabetic_status = gr.Dropdown(["Non-diabetic", "Type 1", "Type 2", "Gestational"], value="Non-diabetic", label="Diabetic Status")
with gr.Column(scale=1):
gr.HTML("<h3>📸 Wound Image</h3>")
wound_image = gr.Image(label="Upload Wound Image", type="filepath")
# Slider to adjust the automatic segmentation mask. Positive values dilate
# (expand) the mask, negative values erode (shrink) it. The value represents
# roughly percentage change where each 5 units corresponds to one iteration.
seg_adjust_slider = gr.Slider(
minimum=-20,
maximum=20,
value=0,
step=1,
label="Segmentation Adjustment",
info="Adjust the automatic segmentation (negative shrinks, positive expands)"
)
gr.HTML("<h3>📝 Medical History</h3>")
previous_treatment = gr.Textbox(label="Previous Treatment", lines=3)
medical_history = gr.Textbox(label="Medical History", lines=3)
medications = gr.Textbox(label="Current Medications", lines=2)
allergies = gr.Textbox(label="Known Allergies", lines=2)
additional_notes = gr.Textbox(label="Additional Notes", lines=3)
# Initial analysis button
analyze_btn = gr.Button("🔬 Preview Segmentation", variant="primary", elem_id="analyze-btn")
# Segmentation preview section (initially hidden)
with gr.Group(visible=False) as segmentation_preview_group:
gr.HTML("<h3>🎯 Segmentation Preview</h3>")
segmentation_preview = gr.Image(label="Automatic Segmentation", interactive=False)
with gr.Row():
accept_segmentation_btn = gr.Button("✅ Accept & Generate Full Report", variant="primary")
manual_edit_btn = gr.Button("✏️ Manual Edit", variant="secondary")
segmentation_only_btn = gr.Button("🎯 Get Segmentation Only", variant="secondary")
# Manual editing section (initially hidden)
with gr.Group(visible=False) as manual_edit_group:
gr.HTML("""
<div style="background: #e6f3ff; padding: 15px; border-radius: 8px; margin: 10px 0;">
<h4 style="margin: 0 0 10px 0; color: #1a365d;">📝 Manual Segmentation Instructions</h4>
<p style="margin: 0; color: #2c5282;">
Use the drawing tool below to manually mark the wound area.
Select the pen tool and draw over the wound region to create your mask.
</p>
</div>
""")
# Manual mask input using ImageMask component
manual_mask_input = gr.ImageMask(
sources=["upload"],
layers=False,
transforms=[],
format="png",
label="Manual Segmentation - Draw on the image to mark wound area",
show_label=True,
interactive=True
)
with gr.Row():
process_manual_btn = gr.Button("🔬 Generate Report with Manual Mask", variant="primary")
manual_segmentation_only_btn = gr.Button("🎯 Get Manual Segmentation Only", variant="secondary")
analysis_output = gr.HTML("")
# ------------------- PATIENT HISTORY -------------------
with gr.Tab("📋 Patient History"):
with gr.Row():
with gr.Column(scale=2):
history_btn = gr.Button("📄 Load Patient History", variant="primary")
patient_history_output = gr.HTML("")
with gr.Column(scale=1):
search_patient_name = gr.Textbox(label="Search patient by name")
search_patient_btn = gr.Button("🔍 Search", variant="secondary")
specific_patient_output = gr.HTML("")
gr.HTML("<hr style='margin:10px 0 6px 0;border:none;border-top:1px solid #e2e8f0'>")
with gr.Row():
view_details_dd = gr.Dropdown(choices=[], label="Select patient to view details")
view_details_btn = gr.Button("📈 View Details (Timeline)", variant="primary")
view_details_output = gr.HTML("")
with gr.Column(visible=False) as organization_panel:
gr.HTML("<div class='status-warning'>Organization dashboard coming soon.</div>")
logout_btn_org = gr.Button("🚪 Logout", variant="secondary")
# ----------------------- handlers -----------------------
def toggle_role_fields(role):
return {
org_fields: gr.update(visible=(role == "organization")),
prac_fields: gr.update(visible=(role != "organization"))
}
def handle_signup(username, email, password, name, role, org_name_v, phone_v, cc_v, dept_v, loc_v, org_dropdown):
try:
organization_id = None
if role == "practitioner":
organization_id = _resolve_org_id_from_dropdown(org_dropdown)
ok = self.auth_manager.create_user(
username=username,
email=email,
password=password,
name=name,
role=role,
org_name=(org_name_v or name) if role == "organization" else "",
phone=phone_v if role == "organization" else "",
country_code=cc_v if role == "organization" else "",
department=dept_v if role == "organization" else "",
location=loc_v if role == "organization" else "",
organization_id=organization_id
)
if ok:
return "<div class='status-success'>✅ Account created. Please log in.</div>"
return "<div class='status-error'>❌ Could not create account. Username/email may exist.</div>"
except Exception as e:
return f"<div class='status-error'>❌ Error: {html.escape(str(e))}</div>"
def handle_login(username, password):
user = self.auth_manager.authenticate_user(username, password)
if not user:
return {
login_status: "<div class='status-error'>❌ Invalid credentials.</div>"
}
self.current_user = user
uid = int(user.get("id"))
role = user.get("role")
if role == "practitioner":
_refresh_patient_dropdown(uid)
info = f"<div class='status-success'>Welcome, <strong>{html.escape(user.get('name','User'))}</strong> — {html.escape(role)}</div>"
updates = {login_status: info}
if role == "practitioner":
updates.update({
auth_panel: gr.update(visible=False),
practitioner_panel: gr.update(visible=True),
user_info: info,
existing_patient_dd: gr.update(choices=self._patient_choices),
view_details_dd: gr.update(choices=self._patient_choices),
})
else:
updates.update({
auth_panel: gr.update(visible=False),
organization_panel: gr.update(visible=True),
})
return updates
def handle_logout():
self.current_user = {}
return {
auth_panel: gr.update(visible=True),
practitioner_panel: gr.update(visible=False),
organization_panel: gr.update(visible=False),
login_status: "<div class='status-warning'>Please sign in.</div>",
segmentation_preview_group: gr.update(visible=False),
manual_edit_group: gr.update(visible=False),
analysis_output: ""
}
def toggle_patient_mode(mode):
return {
existing_patient_dd: gr.update(visible=(mode == "Existing patient")),
new_patient_group: gr.update(visible=(mode == "New patient"))
}
def process_image_for_segmentation(
mode, existing_label, np_name, np_age, np_gender,
w_loc, w_dur, pain, moist, infect, diabetic,
prev_tx, med_hist, meds, alls, notes, img_path, seg_adjust
):
"""Process image and show segmentation preview"""
if not img_path:
return {
segmentation_preview_group: gr.update(visible=False),
analysis_output: "<div class='status-error'>❌ Please upload a wound image.</div>"
}
try:
# Run initial analysis to get segmentation
user_id = int(self.current_user.get("id", 0) or 0)
if not user_id:
return {
segmentation_preview_group: gr.update(visible=False),
analysis_output: "<div class='status-error'>❌ Please login first.</div>"
}
# Prepare questionnaire data for AI
if mode == "Existing patient":
pid = _label_to_id(existing_label)
if not pid:
return {
segmentation_preview_group: gr.update(visible=False),
analysis_output: "<div class='status-warning'>⚠️ Select an existing patient.</div>"
}
# Fetch patient data
row = self.database_manager.execute_query_one(
"SELECT id, name, age, gender FROM patients WHERE id=%s LIMIT 1", (pid,)
)
pcore = row or {}
patient_name_v = pcore.get("name")
patient_age_v = pcore.get("age")
patient_gender_v = pcore.get("gender")
else:
patient_name_v = np_name
patient_age_v = np_age
patient_gender_v = np_gender
q_for_ai = {
'age': patient_age_v,
'diabetic': 'Yes' if diabetic != 'Non-diabetic' else 'No',
'allergies': alls,
'date_of_injury': 'Unknown',
'professional_care': 'Yes',
'oozing_bleeding': 'Minor Oozing' if infect != 'None' else 'None',
'infection': 'Yes' if infect != 'None' else 'No',
'moisture': moist,
'patient_name': patient_name_v,
'patient_gender': patient_gender_v,
'wound_location': w_loc,
'wound_duration': w_dur,
'pain_level': pain,
'previous_treatment': prev_tx,
'medical_history': med_hist,
'medications': meds,
'additional_notes': notes
}
# Run visual analysis only to get segmentation
image_pil = Image.open(img_path)
visual_results = self.wound_analyzer.perform_visual_analysis(image_pil)
if not visual_results:
return {
segmentation_preview_group: gr.update(visible=False),
analysis_output: "<div class='status-error'>❌ Failed to analyze image.</div>"
}
# Get segmentation image path
seg_path = visual_results.get("segmentation_image_path")
if not seg_path or not os.path.exists(seg_path):
return {
segmentation_preview_group: gr.update(visible=False),
analysis_output: "<div class='status-error'>❌ Segmentation failed.</div>"
}
return {
segmentation_preview_group: gr.update(visible=True),
segmentation_preview: seg_path,
manual_edit_group: gr.update(visible=False),
analysis_output: "<div class='status-success'>✅ Segmentation preview ready. Review and choose to accept or manually edit.</div>"
}
except Exception as e:
logging.error(f"Segmentation preview error: {e}")
return {
segmentation_preview_group: gr.update(visible=False),
analysis_output: f"<div class='status-error'>❌ Error: {html.escape(str(e))}</div>"
}
def show_manual_edit_interface(img_path):
"""Show manual editing interface with the original image"""
if not img_path or not os.path.exists(img_path):
return {
manual_edit_group: gr.update(visible=False),
analysis_output: "<div class='status-error'>❌ Original image not available for editing.</div>"
}
return {
manual_edit_group: gr.update(visible=True),
manual_mask_input: img_path, # Load the original image for manual editing
analysis_output: "<div class='status-warning'>⚠️ Use the drawing tool to manually mark the wound area, then click your desired action.</div>"
}
def process_manual_mask(mask_data):
"""Process the manual mask from ImageMask component"""
if not mask_data:
return None
try:
# Extract the mask from the ImageMask component
# The mask_data contains both the background image and the drawn mask
if isinstance(mask_data, dict):
# Check if composite exists (newer format)
if "composite" in mask_data:
composite_img = mask_data["composite"]
# Convert to grayscale and extract the drawn areas
gray = cv2.cvtColor(composite_img, cv2.COLOR_RGB2GRAY)
# Create mask where drawn areas are white (255) and background is black (0)
_, mask = cv2.threshold(gray, 1, 255, cv2.THRESH_BINARY)
# Check if layers exist (older format)
elif "layers" in mask_data and len(mask_data["layers"]) > 0:
# Get the alpha channel from the first layer (the drawn mask)
alpha_channel = mask_data["layers"][0][:, :, 3]
# Convert to binary mask - drawn areas have alpha > 0
mask = np.where(alpha_channel > 0, 255, 0).astype(np.uint8)
else:
return None
# Save the mask temporarily
with tempfile.NamedTemporaryFile(suffix=".png", delete=False) as tmp:
cv2.imwrite(tmp.name, mask)
manual_mask_path = tmp.name
return manual_mask_path
else:
return None
except Exception as e:
logging.error(f"Manual mask processing error: {e}")
return None
def get_segmentation_only(img_path, manual_mask_path=None):
"""Get only the segmentation mask without full analysis"""
try:
if not img_path:
return "<div class='status-error'>❌ No image provided.</div>"
# Run visual analysis to get segmentation
image_pil = Image.open(img_path)
if manual_mask_path:
# Use manual mask
visual_results = self.wound_analyzer.analyze_wound(
img_path, {}, seg_adjust=0.0, manual_mask_path=manual_mask_path
)
mask_type = "Manual"
else:
# Use automatic segmentation
visual_results = self.wound_analyzer.perform_visual_analysis(image_pil)
mask_type = "Automatic"
if not visual_results:
return "<div class='status-error'>❌ Failed to generate segmentation.</div>"
# Get the segmentation mask path
roi_mask_path = visual_results.get("roi_mask_path")
seg_path = visual_results.get("segmentation_image_path")
if not roi_mask_path or not os.path.exists(roi_mask_path):
return "<div class='status-error'>❌ Segmentation mask not found.</div>"
# Convert mask to base64 for display
mask_b64 = self.image_to_base64(roi_mask_path)
seg_b64 = self.image_to_base64(seg_path) if seg_path and os.path.exists(seg_path) else None
html_output = f"""
<div style="max-width: 800px; margin: 0 auto; background: white; border-radius: 16px; box-shadow: 0 8px 32px rgba(0,0,0,0.1); overflow: hidden;">
<div style="background: linear-gradient(135deg, #3182ce 0%, #2c5aa0 100%); color: white; padding: 30px; text-align: center;">
<h1 style="margin: 0; font-size: 28px; font-weight: 700;">🎯 {mask_type} Wound Segmentation</h1>
<p style="margin: 10px 0 0 0; opacity: 0.9; font-size: 16px;">Binary mask showing wound boundaries</p>
</div>
<div style="padding: 30px;">
<div class="status-success" style="margin-bottom: 20px;">
<strong>✅ Segmentation Status:</strong> {mask_type} segmentation completed successfully
</div>
<div style="display: grid; grid-template-columns: 1fr 1fr; gap: 20px; margin: 20px 0;">
<div style="background: #f8f9fa; padding: 20px; border-radius: 12px; text-align: center;">
<h3 style="color: #2d3748; margin-top: 0;">Binary Mask</h3>
{f'<img src="{mask_b64}" style="width: 100%; border-radius: 8px;" alt="Segmentation Mask">' if mask_b64 else '<p>Mask not available</p>'}
<p style="color: #4a5568; margin: 10px 0 0 0; font-size: 14px;">White = Wound, Black = Background</p>
</div>
<div style="background: #f8f9fa; padding: 20px; border-radius: 12px; text-align: center;">
<h3 style="color: #2d3748; margin-top: 0;">Overlay Visualization</h3>
{f'<img src="{seg_b64}" style="width: 100%; border-radius: 8px;" alt="Segmentation Overlay">' if seg_b64 else '<p>Overlay not available</p>'}
<p style="color: #4a5568; margin: 10px 0 0 0; font-size: 14px;">Red overlay shows detected wound area</p>
</div>
</div>
<div style="background: #fff5f5; border: 2px solid #feb2b2; padding: 20px; border-radius: 12px; margin: 20px 0;">
<h3 style="color: #c53030; margin-top: 0;">📥 Download Instructions</h3>
<p style="color: #742a2a; margin: 0;">Right-click on the binary mask image above and select "Save image as..." to download the segmentation mask for your use.</p>
</div>
</div>
</div>
"""
# Clean up temporary file if it exists
if manual_mask_path and os.path.exists(manual_mask_path):
try:
os.unlink(manual_mask_path)
except:
pass
return html_output
except Exception as e:
logging.error(f"Segmentation only error: {e}")
return f"<div class='status-error'>❌ Error: {html.escape(str(e))}</div>"
def run_full_analysis_with_manual_mask(
mode, existing_label, np_name, np_age, np_gender,
w_loc, w_dur, pain, moist, infect, diabetic,
prev_tx, med_hist, meds, alls, notes, img_path, seg_adjust, mask_data
):
"""Run full analysis with manual mask"""
try:
# Process manual mask
manual_mask_path = process_manual_mask(mask_data)
# Run the full analysis with manual mask
result_html = standalone_run_analysis(
self, self.current_user, self.database_manager, self.wound_analyzer,
mode, existing_label, np_name, np_age, np_gender,
w_loc, w_dur, pain, moist, infect, diabetic,
prev_tx, med_hist, meds, alls, notes, img_path,
seg_adjust, manual_mask_path
)
# Clean up temporary file
if manual_mask_path and os.path.exists(manual_mask_path):
try:
os.unlink(manual_mask_path)
except:
pass
return {
analysis_output: result_html,
segmentation_preview_group: gr.update(visible=False),
manual_edit_group: gr.update(visible=False)
}
except Exception as e:
logging.error(f"Manual analysis error: {e}")
return {
analysis_output: f"<div class='status-error'>❌ Analysis failed: {html.escape(str(e))}</div>"
}
def get_manual_segmentation_only(mask_data, img_path):
"""Get only the manual segmentation mask"""
try:
manual_mask_path = process_manual_mask(mask_data)
if not manual_mask_path:
return "<div class='status-error'>❌ Failed to process manual mask.</div>"
result = get_segmentation_only(img_path, manual_mask_path)
return {
analysis_output: result,
segmentation_preview_group: gr.update(visible=False),
manual_edit_group: gr.update(visible=False)
}
except Exception as e:
logging.error(f"Manual segmentation only error: {e}")
return {
analysis_output: f"<div class='status-error'>❌ Error: {html.escape(str(e))}</div>"
}
def get_auto_segmentation_only(img_path):
"""Get only the automatic segmentation mask"""
try:
result = get_segmentation_only(img_path, None)
return {
analysis_output: result,
segmentation_preview_group: gr.update(visible=False),
manual_edit_group: gr.update(visible=False)
}
except Exception as e:
logging.error(f"Auto segmentation only error: {e}")
return {
analysis_output: f"<div class='status-error'>❌ Error: {html.escape(str(e))}</div>"
}
def run_full_analysis_accept_segmentation(
mode, existing_label, np_name, np_age, np_gender,
w_loc, w_dur, pain, moist, infect, diabetic,
prev_tx, med_hist, meds, alls, notes, img_path, seg_adjust
):
"""Run full analysis accepting the automatic segmentation"""
try:
result_html = standalone_run_analysis(
self, self.current_user, self.database_manager, self.wound_analyzer,
mode, existing_label, np_name, np_age, np_gender,
w_loc, w_dur, pain, moist, infect, diabetic,
prev_tx, med_hist, meds, alls, notes, img_path,
seg_adjust, None # No manual mask
)
return {
analysis_output: result_html,
segmentation_preview_group: gr.update(visible=False),
manual_edit_group: gr.update(visible=False)
}
except Exception as e:
logging.error(f"Analysis error: {e}")
return {
analysis_output: f"<div class='status-error'>❌ Analysis failed: {html.escape(str(e))}</div>"
}
def load_patient_history():
try:
uid = int(self.current_user.get("id", 0))
if not uid:
return "<div class='status-error'>❌ Please login first.</div>"
history_data = self.patient_history_manager.get_patient_history(uid)
if not history_data:
return "<div class='status-warning'>⚠️ No patient history found.</div>"
html_report = self.report_generator.generate_history_report(history_data)
return html_report
except Exception as e:
logging.error(f"History load error: {e}")
return f"<div class='status-error'>❌ Error: {html.escape(str(e))}</div>"
def search_patient_by_name(name):
try:
uid = int(self.current_user.get("id", 0))
if not uid:
return "<div class='status-error'>❌ Please login first.</div>"
if not name or not name.strip():
return "<div class='status-warning'>⚠️ Enter a patient name to search.</div>"
results = self.patient_history_manager.search_patients_by_name(uid, name.strip())
if not results:
return f"<div class='status-warning'>⚠️ No patients found matching '{html.escape(name)}'.</div>"
html_report = self.report_generator.generate_search_results(results, name)
return html_report
except Exception as e:
logging.error(f"Patient search error: {e}")
return f"<div class='status-error'>❌ Error: {html.escape(str(e))}</div>"
def view_patient_details(selected_label):
try:
uid = int(self.current_user.get("id", 0))
if not uid:
return "<div class='status-error'>❌ Please login first.</div>"
pid = _label_to_id(selected_label)
if not pid:
return "<div class='status-warning'>⚠️ Select a patient to view details.</div>"
details = self.patient_history_manager.get_patient_details(uid, pid)
if not details:
return "<div class='status-warning'>⚠️ No details found for selected patient.</div>"
html_report = self.report_generator.generate_patient_timeline(details)
return html_report
except Exception as e:
logging.error(f"Patient details error: {e}")
return f"<div class='status-error'>❌ Error: {html.escape(str(e))}</div>"
# ----------------------- Event bindings -----------------------
signup_role.change(toggle_role_fields, [signup_role], [org_fields, prac_fields])
signup_btn.click(
handle_signup,
[signup_username, signup_email, signup_password, signup_name, signup_role,
org_name, phone, country_code, department, location, organization_dropdown],
[signup_status]
)
login_btn.click(
handle_login,
[login_username, login_password],
[login_status, auth_panel, practitioner_panel, organization_panel, user_info,
existing_patient_dd, view_details_dd]
)
logout_btn_prac.click(
handle_logout,
[],
[auth_panel, practitioner_panel, organization_panel, login_status,
segmentation_preview_group, manual_edit_group, analysis_output]
)
logout_btn_org.click(
handle_logout,
[],
[auth_panel, practitioner_panel, organization_panel, login_status,
segmentation_preview_group, manual_edit_group, analysis_output]
)
patient_mode.change(toggle_patient_mode, [patient_mode], [existing_patient_dd, new_patient_group])
# Segmentation preview workflow
analyze_btn.click(
process_image_for_segmentation,
[patient_mode, existing_patient_dd, new_patient_name, new_patient_age, new_patient_gender,
wound_location, wound_duration, pain_level, moisture_level, infection_signs, diabetic_status,
previous_treatment, medical_history, medications, allergies, additional_notes, wound_image, seg_adjust_slider],
[segmentation_preview_group, segmentation_preview, manual_edit_group, analysis_output]
)
# Accept segmentation and generate full report
accept_segmentation_btn.click(
run_full_analysis_accept_segmentation,
[patient_mode, existing_patient_dd, new_patient_name, new_patient_age, new_patient_gender,
wound_location, wound_duration, pain_level, moisture_level, infection_signs, diabetic_status,
previous_treatment, medical_history, medications, allergies, additional_notes, wound_image, seg_adjust_slider],
[analysis_output, segmentation_preview_group, manual_edit_group]
)
# Get segmentation only (automatic)
segmentation_only_btn.click(
get_auto_segmentation_only,
[wound_image],
[analysis_output, segmentation_preview_group, manual_edit_group]
)
# Show manual edit interface
manual_edit_btn.click(
show_manual_edit_interface,
[wound_image],
[manual_edit_group, manual_mask_input, analysis_output]
)
# Process manual mask and generate report
process_manual_btn.click(
run_full_analysis_with_manual_mask,
[patient_mode, existing_patient_dd, new_patient_name, new_patient_age, new_patient_gender,
wound_location, wound_duration, pain_level, moisture_level, infection_signs, diabetic_status,
previous_treatment, medical_history, medications, allergies, additional_notes, wound_image, seg_adjust_slider, manual_mask_input],
[analysis_output, segmentation_preview_group, manual_edit_group]
)
# Get manual segmentation only
manual_segmentation_only_btn.click(
get_manual_segmentation_only,
[manual_mask_input, wound_image],
[analysis_output, segmentation_preview_group, manual_edit_group]
)
history_btn.click(load_patient_history, [], [patient_history_output])
search_patient_btn.click(search_patient_by_name, [search_patient_name], [specific_patient_output])
view_details_btn.click(view_patient_details, [view_details_dd], [view_details_output])
return app
def _format_comprehensive_analysis_results(self, analysis_result, image_path, questionnaire_data):
"""Format comprehensive analysis results with enhanced visual presentation
- Shows 'Manual Segmentation' card if a manual mask/overlay was used
- Removes the Measurements card from the Visual Analysis Gallery
"""
import os
try:
visual_analysis = analysis_result.get("visual_analysis", {}) or {}
report = analysis_result.get("report", "")
# Extract key metrics
wound_type = visual_analysis.get("wound_type", "Unknown")
length_cm = visual_analysis.get("length_cm", 0)
breadth_cm = visual_analysis.get("breadth_cm", 0)
area_cm2 = visual_analysis.get("surface_area_cm2", 0)
skin_tone_label = visual_analysis.get("skin_tone_label", "Unknown")
ita_deg = visual_analysis.get("ita_degrees")
tissue_type = visual_analysis.get("tissue_type", "Unknown")
# Detect if manual mask was used (look across common keys/flags)
manual_used = bool(
analysis_result.get("manual_mask_used")
or visual_analysis.get("manual_mask_used")
)
# Try to discover manual overlay/binary mask paths (handle multiple possible keys)
manual_overlay_path = None
for k in [
"manual_segmentation_image_path",
"manual_overlay_path",
"manual_segmentation_overlay_path",
]:
p = visual_analysis.get(k)
if p and os.path.exists(p):
manual_overlay_path = p
manual_used = True
break
manual_binary_path = None
for k in [
"manual_roi_mask_path",
"manual_mask_binary_path",
"manual_mask_path",
]:
p = visual_analysis.get(k)
if p and os.path.exists(p):
manual_binary_path = p
manual_used = True
break
# Generate risk assessment
risk_assessment = self._generate_risk_assessment(questionnaire_data)
risk_level = risk_assessment.get("risk_level", "Unknown")
risk_score = risk_assessment.get("risk_score", 0)
risk_factors = risk_assessment.get("risk_factors", [])
risk_class = risk_level.lower().replace(" ", "_")
# Format risk factors
if risk_factors:
risk_factors_html = "<ul style='margin: 10px 0; padding-left: 20px;'>"
for factor in risk_factors:
risk_factors_html += f"<li style='margin: 5px 0; color: #2d3748;'>{html.escape(str(factor))}</li>"
risk_factors_html += "</ul>"
else:
risk_factors_html = "<p style='color: #4a5568; font-style: italic;'>No specific risk factors identified.</p>"
# ---------------------- Image Gallery ----------------------
image_gallery_html = "<div class='image-gallery'>"
# Original image
if image_path and os.path.exists(image_path):
img_b64 = self.image_to_base64(image_path)
if img_b64:
image_gallery_html += f"""
<div class="image-item">
<img src="{img_b64}" alt="Original Wound Image">
<h4>📸 Original Image</h4>
<p>Uploaded wound photograph for analysis</p>
</div>
"""
# Detection visualization
detection_path = visual_analysis.get("detection_image_path")
if detection_path and os.path.exists(detection_path):
img_b64 = self.image_to_base64(detection_path)
if img_b64:
conf = visual_analysis.get('detection_confidence', 0.0)
try:
conf_str = f"{float(conf):.1%}"
except Exception:
conf_str = str(conf)
image_gallery_html += f"""
<div class="image-item">
<img src="{img_b64}" alt="Wound Detection">
<h4>🎯 Wound Detection</h4>
<p>AI-powered wound boundary detection with confidence: {conf_str}</p>
</div>
"""
# Show MANUAL segmentation card if available/used
if manual_overlay_path or manual_binary_path:
if manual_overlay_path and os.path.exists(manual_overlay_path):
img_b64 = self.image_to_base64(manual_overlay_path)
elif manual_binary_path and os.path.exists(manual_binary_path):
img_b64 = self.image_to_base64(manual_binary_path)
else:
img_b64 = None
if img_b64:
image_gallery_html += f"""
<div class="image-item">
<img src="{img_b64}" alt="Manual Segmentation">
<h4>✏️ Manual Segmentation</h4>
<p>Clinician-adjusted wound boundary used for this report</p>
</div>
"""
# Automatic segmentation (still show if present)
seg_path = visual_analysis.get("segmentation_image_path")
if seg_path and os.path.exists(seg_path):
img_b64 = self.image_to_base64(seg_path)
if img_b64:
image_gallery_html += f"""
<div class="image-item">
<img src="{img_b64}" alt="Wound Segmentation">
<h4>🔍 Wound Segmentation</h4>
<p>Precise wound boundary identification and tissue analysis</p>
</div>
"""
# NOTE: Measurements card intentionally REMOVED from gallery as requested
# (Do NOT add segmentation_annotated_path card)
image_gallery_html += "</div>"
# Convert report markdown to HTML
report_html = self.markdown_to_html(report) if report else ""
status_line = (
"Analysis completed successfully with <strong>manual</strong> segmentation"
if manual_used else
"Analysis completed successfully with comprehensive wound assessment"
)
html_output = f"""
<div style="max-width: 1200px; margin: 0 auto; background: white; border-radius: 16px; box-shadow: 0 8px 32px rgba(0,0,0,0.1); overflow: hidden;">
<div style="background: linear-gradient(135deg, #3182ce 0%, #2c5aa0 100%); color: white; padding: 40px; text-align: center;">
<h1 style="margin: 0; font-size: 32px; font-weight: 700;">🔬 SmartHeal AI Comprehensive Analysis</h1>
<p style="margin: 15px 0 0 0; opacity: 0.9; font-size: 18px;">Advanced Computer Vision & Medical AI Assessment</p>
<div style="background: rgba(255,255,255,0.1); padding: 15px; border-radius: 8px; margin-top: 20px;">
<p style="margin: 0; font-size: 16px;"><strong>Patient:</strong> {html.escape(str(questionnaire_data.get('patient_name', 'Unknown')))} | <strong>Analysis Date:</strong> {datetime.now().strftime('%Y-%m-%d %H:%M:%S')}</p>
</div>
</div>
<div style="padding: 40px;">
<div class="status-success" style="margin-bottom: 30px;">
<strong>✅ Analysis Status:</strong> {status_line}
</div>
<!-- Image Gallery Section -->
<div style="margin-bottom: 40px;">
<h2 style="color: #2d3748; font-size: 24px; margin-bottom: 20px; border-bottom: 2px solid #e53e3e; padding-bottom: 10px;">🖼️ Visual Analysis Gallery</h2>
{image_gallery_html}
</div>
<!-- Wound Detection & Classification -->
<div style="background: #f8f9fa; padding: 30px; border-radius: 12px; margin-bottom: 30px;">
<h2 style="color: #2d3748; margin-top: 0;">🔍 Wound Detection & Classification</h2>
<div style="display: grid; grid-template-columns: repeat(auto-fit, minmax(200px, 1fr)); gap: 20px; margin: 20px 0;">
<div style="background: white; padding: 20px; border-radius: 8px; text-align: center; box-shadow: 0 2px 8px rgba(0,0,0,0.1);">
<h3 style="color: #3182ce; margin: 0 0 10px 0;">Wound Type</h3>
<p style="font-weight: 600; font-size: 18px; color: #2d3748; margin: 0;">{html.escape(str(wound_type))}</p>
</div>
<div style="background: white; padding: 20px; border-radius: 8px; text-align: center; box-shadow: 0 2px 8px rgba(0,0,0,0.1);">
<h3 style="color: #3182ce; margin: 0 0 10px 0;">Location</h3>
<p style="font-weight: 600; font-size: 18px; color: #2d3748; margin: 0;">{html.escape(str(questionnaire_data.get('wound_location', 'Not specified')))}</p>
</div>
<div style="background: white; padding: 20px; border-radius: 8px; text-align: center; box-shadow: 0 2px 8px rgba(0,0,0,0.1);">
<h3 style="color: #3182ce; margin: 0 0 10px 0;">Skin Tone</h3>
<p style="font-weight: 600; font-size: 18px; color: #2d3748; margin: 0;">{html.escape(str(skin_tone_label))}{f" ({ita_deg:.1f}°)" if ita_deg is not None else ""}</p>
</div>
<div style="background: white; padding: 20px; border-radius: 8px; text-align: center; box-shadow: 0 2px 8px rgba(0,0,0,0.1);">
<h3 style="color: #3182ce; margin: 0 0 10px 0;">Tissue Type</h3>
<p style="font-weight: 600; font-size: 18px; color: #2d3748; margin: 0;">{html.escape(str(tissue_type))}</p>
</div>
</div>
</div>
<!-- Wound Measurements (numeric section remains) -->
<div style="background: #e7f5ff; padding: 30px; border-radius: 12px; margin-bottom: 30px;">
<h2 style="color: #2d3748; margin-top: 0;">📏 Wound Measurements</h2>
<div style="display: grid; grid-template-columns: repeat(auto-fit, minmax(150px, 1fr)); gap: 20px; margin: 20px 0;">
<div style="background: white; padding: 20px; border-radius: 8px; text-align: center; box-shadow: 0 2px 8px rgba(0,0,0,0.1);">
<h3 style="color: #e53e3e; margin: 0 0 10px 0;">Length</h3>
<p style="font-weight: 700; font-size: 24px; color: #2d3748; margin: 0;">{length_cm:.2f} cm</p>
</div>
<div style="background: white; padding: 20px; border-radius: 8px; text-align: center; box-shadow: 0 2px 8px rgba(0,0,0,0.1);">
<h3 style="color: #e53e3e; margin: 0 0 10px 0;">Width</h3>
<p style="font-weight: 700; font-size: 24px; color: #2d3748; margin: 0;">{breadth_cm:.2f} cm</p>
</div>
<div style="background: white; padding: 20px; border-radius: 8px; text-align: center; box-shadow: 0 2px 8px rgba(0,0,0,0.1);">
<h3 style="color: #e53e3e; margin: 0 0 10px 0;">Surface Area</h3>
<p style="font-weight: 700; font-size: 24px; color: #2d3748; margin: 0;">{area_cm2:.2f} cm²</p>
</div>
</div>
</div>
<!-- Patient Information Summary -->
<div style="background: #f0f8f0; padding: 30px; border-radius: 12px; margin-bottom: 30px;">
<h2 style="color: #2d3748; margin-top: 0;">👤 Patient Information Summary</h2>
<div style="display: grid; grid-template-columns: repeat(auto-fit, minmax(250px, 1fr)); gap: 15px;">
<div><strong>Age:</strong> {html.escape(str(questionnaire_data.get('age', 'Not specified')))} years</div>
<div><strong>Gender:</strong> {html.escape(str(questionnaire_data.get('patient_gender', 'Not specified')))}</div>
<div><strong>Diabetic Status:</strong> {html.escape(str(questionnaire_data.get('diabetic', 'Unknown')))}</div>
<div><strong>Pain Level:</strong> {html.escape(str(questionnaire_data.get('pain_level', 'Not assessed')))} / 10</div>
<div><strong>Wound Duration:</strong> {html.escape(str(questionnaire_data.get('wound_duration', 'Not specified')))}</div>
<div><strong>Moisture Level:</strong> {html.escape(str(questionnaire_data.get('moisture', 'Not assessed')))}</div>
</div>
{f"<div style='margin-top: 20px;'><strong>Medical History:</strong> {html.escape(str(questionnaire_data.get('medical_history', 'None provided')))}</div>" if questionnaire_data.get('medical_history') else ""}
{f"<div style='margin-top: 10px;'><strong>Current Medications:</strong> {html.escape(str(questionnaire_data.get('medications', 'None listed')))}</div>" if questionnaire_data.get('medications') else ""}
{f"<div style='margin-top: 10px;'><strong>Known Allergies:</strong> {html.escape(str(questionnaire_data.get('allergies', 'None listed')))}</div>" if questionnaire_data.get('allergies') else ""}
</div>
<!-- AI Generated Report -->
{f'<div style="background: #f8f9fa; padding: 30px; border-radius: 12px; margin-bottom: 30px;"><h2 style="color: #2d3748; margin-top: 0;">🤖 AI-Generated Clinical Report</h2><div style="background: white; padding: 25px; border-radius: 8px; box-shadow: 0 2px 8px rgba(0,0,0,0.05);">{report_html}</div></div>' if report_html else ''}
<!-- Important Disclaimers -->
<div style="background: #fff5f5; border: 2px solid #feb2b2; padding: 25px; border-radius: 12px; margin: 30px 0;">
<h3 style="color: #c53030; margin-top: 0;">⚠️ Important Medical Disclaimers</h3>
<ul style="color: #742a2a; line-height: 1.6;">
<li><strong>Not a Medical Diagnosis:</strong> This AI analysis is for informational purposes only and does not constitute medical advice, diagnosis, or treatment.</li>
<li><strong>Professional Consultation Required:</strong> Always consult with qualified healthcare professionals for proper clinical assessment and treatment decisions.</li>
<li><strong>Measurement Accuracy:</strong> All measurements are estimates based on computer vision algorithms and should be verified with clinical tools.</li>
<li><strong>Risk Assessment Limitations:</strong> Risk factors are based on provided information and may not reflect the complete clinical picture.</li>
</ul>
</div>
<!-- Footer -->
<div style="text-align: center; padding: 30px 0; border-top: 2px solid #e2e8f0; margin-top: 30px;">
<p style="color: #6c757d; font-style: italic; font-size: 16px; margin: 0;">
🏥 Analysis completed by <strong>SmartHeal AI</strong> - Advanced Wound Care Assistant<br>
<small>Report generated on {datetime.now().strftime('%B %d, %Y at %I:%M %p')}</small>
</p>
</div>
</div>
</div>
"""
return html_output
except Exception as e:
logging.error(f"Error formatting comprehensive results: {e}")
return f"<div class='status-error'>❌ Error displaying results: {str(e)}</div>"
def _generate_risk_assessment(self, questionnaire_data):
"""Generate risk assessment based on questionnaire data"""
if not questionnaire_data:
return {'risk_level': 'Unknown', 'risk_score': 0, 'risk_factors': []}
risk_factors = []
risk_score = 0
try:
# Age
age = questionnaire_data.get('age', 0)
if isinstance(age, str):
try:
age = int(age)
except ValueError:
age = 0
if age > 65:
risk_factors.append("Advanced age (>65 years)")
risk_score += 2
elif age > 50:
risk_factors.append("Older adult (50-65 years)")
risk_score += 1
# Diabetes
diabetic_status = str(questionnaire_data.get('diabetic', '')).lower()
if 'yes' in diabetic_status:
risk_factors.append("Diabetes mellitus")
risk_score += 3
# Infection
infection = str(questionnaire_data.get('infection', '')).lower()
if 'yes' in infection:
risk_factors.append("Signs of infection present")
risk_score += 3
# Pain
pain_level = questionnaire_data.get('pain_level', 0)
if isinstance(pain_level, str):
try:
pain_level = float(pain_level)
except ValueError:
pain_level = 0
if pain_level >= 7:
risk_factors.append("High pain level (≥7/10)")
risk_score += 2
elif pain_level >= 5:
risk_factors.append("Moderate pain level (5-6/10)")
risk_score += 1
# Duration
duration = str(questionnaire_data.get('wound_duration', '')).lower()
if any(term in duration for term in ['month', 'months', 'year', 'years']):
risk_factors.append("Chronic wound (>4 weeks)")
risk_score += 3
# Moisture
moisture = str(questionnaire_data.get('moisture', '')).lower()
if any(term in moisture for term in ['wet', 'saturated']):
risk_factors.append("Excessive wound exudate")
risk_score += 1
# Medical history
medical_history = str(questionnaire_data.get('medical_history', '')).lower()
if any(term in medical_history for term in ['vascular', 'circulation', 'heart']):
risk_factors.append("Cardiovascular disease")
risk_score += 2
if any(term in medical_history for term in ['immune', 'cancer', 'steroid']):
risk_factors.append("Immune system compromise")
risk_score += 2
if any(term in medical_history for term in ['smoking', 'tobacco']):
risk_factors.append("Smoking history")
risk_score += 2
# Risk level
if risk_score >= 8:
risk_level = "Very High"
elif risk_score >= 6:
risk_level = "High"
elif risk_score >= 3:
risk_level = "Moderate"
else:
risk_level = "Low"
return {
'risk_score': risk_score,
'risk_level': risk_level,
'risk_factors': risk_factors
}
except Exception as e:
logging.error(f"Risk assessment error: {e}")
return {
'risk_score': 0,
'risk_level': 'Unknown',
'risk_factors': ['Unable to assess risk due to data processing error']
}
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