Update app.py

app.py

@@ -193,10 +193,10 @@ def cellpose_segment(filepath, resize = 1000):
             target_size = (img_input.shape[1], img_input.shape[0])
             if (target_size[0]!=img.shape[1] or target_size[1]!=img.shape[0]):
                 # scale it back to keep the orignal size
-                masks = cv2.resize(masks.astype('uint16'), target_size, interpolation=cv2.INTER_NEAREST).astype('uint16')
+                masks_rsz = cv2.resize(masks.astype('uint16'), target_size, interpolation=cv2.INTER_NEAREST).astype('uint16')
     
             fname_masks = os.path.splitext(filepath[j])[0]+"_masks.tif"
-            imsave(fname_masks, masks)
+            imsave(fname_masks, masks_rsz)
     
             myzip.write(fname_masks, arcname = os.path.split(fname_masks)[-1])